Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002569annotation not available (1009 aa)    
Predicted Functional Partners:
ENSVPAP00000009542
annotation not available
   
 0.791
OASL
2'-5'-oligoadenylate synthetase like.
   
 0.739
NAP1L5
Nucleosome assembly protein 1 like 5.
      
 0.661
RPS27A
Ribosomal protein S27a.
    
  0.633
ENSVPAP00000002735
annotation not available
    
 0.629
ENSVPAP00000001227
annotation not available
   
 
 0.627
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.625
UBE4A
Ubiquitination factor E4A.
   
 0.597
ENSVPAP00000009656
annotation not available
   
 
 0.594
ENSVPAP00000011352
annotation not available
   
 
 0.594
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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