Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OLFM3Olfactomedin 3. (474 aa)    
Predicted Functional Partners:
CDH11
Cadherin 11.
  
  
 0.736
PCSK2
Proprotein convertase subtilisin/kexin type 2.
   
  
 0.709
CDH2
Cadherin 2.
  
   
 0.703
ENSVPAP00000008328
annotation not available
   
 
 0.668
SLITRK1
SLIT and NTRK like family member 1.
   
 
 0.666
SLITRK3
SLIT and NTRK like family member 3.
   
 
 0.651
ENSVPAP00000010323
annotation not available
   
 
 0.641
ITGA6
Integrin subunit alpha 6.
      
 0.615
FLOT1
Flotillin 1.
      
 0.607
ENSVPAP00000003558
annotation not available
      
 0.605
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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