Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YAE1YAE1 maturation factor of ABCE1. (226 aa)    
Predicted Functional Partners:
LTO1
LTO1 maturation factor of ABCE1.
   
 
 0.966
ABCE1
ATP binding cassette subfamily E member 1.
    
 
 0.943
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 
 0.748
PRIM2
DNA primase subunit 2.
      
 0.692
ENSVPAP00000005439
annotation not available
   
  
 0.690
ELP3
Elongator acetyltransferase complex subunit 3.
   
  
 0.681
ENSVPAP00000002483
annotation not available
      
 0.663
POLR3F
RNA polymerase III subunit F.
   
  
 0.639
BLZF1
Basic leucine zipper nuclear factor 1.
      
 0.631
CIAPIN1
Cytokine induced apoptosis inhibitor 1.
   
  
 0.596
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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