Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002606annotation not available (235 aa)    
Predicted Functional Partners:
PGBD1
piggyBac transposable element derived 1.
    
   0.965
ENSVPAP00000004674
annotation not available
    
   0.965
ZSCAN29
Zinc finger and SCAN domain containing 29.
    
   0.924
ZSCAN21
Zinc finger and SCAN domain containing 21.
    
   0.780
ZBTB25
Zinc finger and BTB domain containing 25.
      
 0.618
ZNF644
Zinc finger protein 644.
      
 0.605
ENSVPAP00000003396
annotation not available
    
 0.582
GABPA
GA binding protein transcription factor subunit alpha.
    
 
 0.550
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.530
ZMYND8
Zinc finger MYND-type containing 8.
    
 
 0.523
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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