Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIGMPhosphatidylinositol glycan anchor biosynthesis class M. (403 aa)    
Predicted Functional Partners:
PIGX
Phosphatidylinositol glycan anchor biosynthesis class X.
     
 0.998
PIGW
Phosphatidylinositol glycan anchor biosynthesis class W.
     
 0.984
PIGB
Phosphatidylinositol glycan anchor biosynthesis class B.
     
 0.977
ENSVPAP00000009650
annotation not available
    
 0.975
DPM3
Dolichyl-phosphate mannosyltransferase subunit 3, regulatory.
     
 0.849
ENSVPAP00000005696
annotation not available
     
 0.832
PUM2
Pumilio RNA binding family member 2.
    
   0.798
PUM1
Pumilio RNA binding family member 1.
    
   0.798
MRE11
MRE11 homolog, double strand break repair nuclease.
    
   0.781
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
    
 
 0.775
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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