Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LYPD1LY6/PLAUR domain containing 1. (155 aa)    
Predicted Functional Partners:
CALB1
Calbindin 1.
   
  
 0.641
MGAT4C
MGAT4 family member C.
   
  
 0.623
PLK2
Polo like kinase 2.
      
 0.611
NXPH2
Neurexophilin 2.
      
 0.604
NDNF
Neuron derived neurotrophic factor.
      
 0.590
MME
Membrane metalloendopeptidase.
    
 
 0.529
LYNX1
Ly6/neurotoxin 1.
      
 0.522
NTNG1
Netrin G1.
      
 0.517
CITED1
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1.
      
 0.481
SLC17A8
Solute carrier family 17 member 8.
      
 0.480
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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