Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
INO80INO80 complex ATPase subunit. (1541 aa)    
Predicted Functional Partners:
INO80C
INO80 complex subunit C.
    
 0.999
INO80D
INO80 complex subunit D.
    
 0.998
ACTR5
Actin related protein 5.
    
 0.998
ACTR8
Actin related protein 8.
   
 0.998
ZFP42
ZFP42 zinc finger protein.
   
  0.994
ACTL6A
Actin like 6A.
    
 0.992
UCHL5
Ubiquitin C-terminal hydrolase L5.
    
 0.982
ENSVPAP00000007248
annotation not available
   
 0.924
ENSVPAP00000008395
annotation not available
    
  0.912
FANCM
FA complementation group M.
  
 0.888
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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