Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRPX2Sushi repeat containing protein X-linked 2. (464 aa)    
Predicted Functional Partners:
FOXP1
Forkhead box P1.
    
 
 0.719
GNPTG
N-acetylglucosamine-1-phosphate transferase subunit gamma.
      
 0.612
GNPTAB
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta.
      
 0.607
HLF
HLF transcription factor, PAR bZIP family member.
      
 0.599
WSCD2
WSC domain containing 2.
      
 0.599
FOXP2
Forkhead box P2.
    
 
 0.557
ADCY4
Adenylate cyclase 4.
      
 0.545
ELP4
Elongator acetyltransferase complex subunit 4.
      
 0.526
KLHL10
Kelch like family member 10.
      
 0.524
ENSVPAP00000000827
annotation not available
      
 0.521
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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