Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THUMPD3THUMP domain containing 3. (417 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
   
 0.912
MICU3
Mitochondrial calcium uptake family member 3.
    
   0.907
SETD5
SET domain containing 5.
      
 0.764
ITSN1
Intersectin 1.
   
 0.745
LHFPL4
LHFPL tetraspan subfamily member 4.
      
 0.690
INTS10
Integrator complex subunit 10.
      
 0.681
UTP20
UTP20 small subunit processome component.
      
 0.678
TRMT11
tRNA methyltransferase 11 homolog.
     
 0.673
WASL
WASP like actin nucleation promoting factor.
   
 0.665
ENSVPAP00000004767
annotation not available
   
 0.665
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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