Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002674annotation not available (364 aa)    
Predicted Functional Partners:
ISCA2
Iron-sulfur cluster assembly 2.
     
 0.841
PNISR
PNN interacting serine and arginine rich protein.
   
 
 0.799
RBM17
RNA binding motif protein 17.
    
 
 0.741
NSMCE4A
NSE4 homolog A, SMC5-SMC6 complex component.
    
 
 0.713
ENSVPAP00000002676
annotation not available
     
 0.670
ARL4A
ADP ribosylation factor like GTPase 4A.
   
 0.619
DOK5
Docking protein 5.
    
 
 0.610
OR51V1
Olfactory receptor family 51 subfamily V member 1.
    
 
 0.593
ENSVPAP00000000065
annotation not available
      
 0.591
ETS1
ETS proto-oncogene 1, transcription factor.
    
 0.573
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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