Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002675annotation not available (679 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
   
 0.999
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
    
 0.999
WIPI1
WD repeat domain, phosphoinositide interacting 1.
    
 
 0.951
SOAT1
Sterol O-acyltransferase 1.
      
 0.923
STK40
Serine/threonine kinase 40.
    
 
 0.921
USP33
Ubiquitin specific peptidase 33.
      
 0.905
DNAJB4
DnaJ heat shock protein family (Hsp40) member B4.
      
 0.895
SETD2
SET domain containing 2, histone lysine methyltransferase.
    
   0.837
PPIP5K1
Diphosphoinositol pentakisphosphate kinase 1.
    
   0.812
ETF1
Eukaryotic translation termination factor 1.
    
   0.796
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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