Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALB2Calbindin 2. (271 aa)    
Predicted Functional Partners:
ENSVPAP00000000769
annotation not available
    
 
 0.872
ENSVPAP00000001766
annotation not available
   
 0.795
CNN3
Calponin 3.
   
 0.795
GRIK1
Glutamate ionotropic receptor kainate type subunit 1.
   
 0.783
SST
Somatostatin.
   
  
 0.764
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.757
GAD1
Glutamate decarboxylase 1.
   
 
 0.734
GAD2
Glutamate decarboxylase 2.
   
 
 0.733
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 0.712
ENSVPAP00000002547
annotation not available
   
 0.705
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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