Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
PKD1L3Polycystin 1 like 3, transient receptor potential channel interacting. (1646 aa)    
Predicted Functional Partners:
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
    
 
 0.992
PKD2
Polycystin 2, transient receptor potential cation channel.
    
 
 0.807
TTC17
Tetratricopeptide repeat domain 17.
   
  
 0.734
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
    
 
 0.730
ENSVPAP00000007450
annotation not available
      
 0.698
PRSS37
Serine protease 37.
      
 0.688
ENSVPAP00000007670
annotation not available
    
 
 0.649
PRKD1
Protein kinase D1.
    
 
 0.649
TAS2R4
Taste 2 receptor member 4.
      
 0.613
ZC3H14
Zinc finger CCCH-type containing 14.
    
   0.611
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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