Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TXNL4BThioredoxin like 4B. (105 aa)    
Predicted Functional Partners:
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
 0.975
ZMAT2
Zinc finger matrin-type 2.
   
 0.966
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
  0.955
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.947
LSM8
LSM8 homolog, U6 small nuclear RNA associated.
   
 0.946
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.945
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.942
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
 0.940
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.937
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.935
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.