Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002702annotation not available (706 aa)    
Predicted Functional Partners:
ENSVPAP00000002367
annotation not available
    
 
 0.956
ENSVPAP00000001538
annotation not available
   
 
 0.908
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.896
RAB8A
RAB8A, member RAS oncogene family.
   
 
 0.879
RAB10
RAB10, member RAS oncogene family.
   
 
 0.801
ENSVPAP00000008326
annotation not available
   
 
 0.783
RBBP6
RB binding protein 6, ubiquitin ligase.
      
 0.678
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 
 0.643
PLXNC1
Plexin C1.
    
 
 0.625
ENSVPAP00000007223
annotation not available
    
 
 0.625
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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