Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TSEN15tRNA splicing endonuclease subunit 15. (142 aa)    
Predicted Functional Partners:
ENSVPAP00000010300
annotation not available
    
 0.998
ENSVPAP00000011681
annotation not available
    
 0.991
HSPBP1
HSPA (Hsp70) binding protein 1.
      
 0.676
RANGRF
RAN guanine nucleotide release factor.
    
   0.634
ENSVPAP00000010696
annotation not available
      
 0.609
RDH12
Retinol dehydrogenase 12.
      
 0.598
ENSVPAP00000009147
annotation not available
      
 0.593
ENSVPAP00000004026
annotation not available
      
 0.591
STAG3
Stromal antigen 3.
      
 0.581
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
      
 0.553
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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