Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCCIPBRCA2 and CDKN1A interacting protein. (265 aa)    
Predicted Functional Partners:
EIF6
Eukaryotic translation initiation factor 6.
   
 
 0.982
RPL23
Ribosomal protein L23.
   
 
 0.968
TENT5A
Terminal nucleotidyltransferase 5A.
    
 
 0.952
CDKN1A
Cyclin dependent kinase inhibitor 1A.
    
 
 0.946
TENT5D
Terminal nucleotidyltransferase 5D.
    
 
 0.918
EBNA1BP2
EBNA1 binding protein 2.
   
  
 0.915
BRCA2
BRCA2 DNA repair associated.
    
 
 0.908
RPF2
Ribosome production factor 2 homolog.
   
  
 0.868
RAD51
RAD51 recombinase.
    
 
 0.861
ENSVPAP00000002774
annotation not available
   
 
 0.853
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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