Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SMPD1Sphingomyelin phosphodiesterase 1. (524 aa)    
Predicted Functional Partners:
SGMS2
Sphingomyelin synthase 2.
     
 0.981
ASAH1
N-acylsphingosine amidohydrolase 1.
   
 0.974
SMPD2
Sphingomyelin phosphodiesterase 2.
     
 0.961
DEGS1
Delta 4-desaturase, sphingolipid 1.
     
 0.959
GALC
Galactosylceramidase.
     
 0.957
SAMD8
Sterile alpha motif domain containing 8.
     
 0.954
CERS5
Ceramide synthase 5.
     
 0.949
ASAH2B
N-acylsphingosine amidohydrolase 2B.
     
 0.949
CERS6
Ceramide synthase 6.
     
 0.949
CERS3
Ceramide synthase 3.
     
 0.944
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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