Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTPRZ1Protein tyrosine phosphatase receptor type Z1. (2282 aa)    
Predicted Functional Partners:
PTN
Pleiotrophin.
   
 0.992
TNR
Tenascin R.
   
   0.964
ENSVPAP00000009282
annotation not available
   
 
 0.952
C2CD3
C2 domain containing 3 centriole elongation regulator.
      
 0.951
TNC
Tenascin C.
   
   0.940
CNTN1
Contactin 1.
   
 
 0.940
IL34
Interleukin 34.
    
 0.931
ENSVPAP00000006872
annotation not available
    
 0.870
APOB
Apolipoprotein B.
    
 0.867
ITGAV
Integrin subunit alpha V.
    
  0.854
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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