Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FEZF1FEZ family zinc finger 1. (471 aa)    
Predicted Functional Partners:
WDR11
WD repeat domain 11.
    
 
 0.710
ENSVPAP00000007739
annotation not available
      
 0.691
TBR1
T-box brain transcription factor 1.
   
 
 0.687
ACTR8
Actin related protein 8.
    
 0.666
ENSVPAP00000001520
annotation not available
    
 0.646
ENSVPAP00000009082
annotation not available
    
 0.646
TAC3
Tachykinin precursor 3.
      
 0.642
GPR149
G protein-coupled receptor 149.
    
 
 0.640
LHX9
LIM homeobox 9.
  
 
 0.621
TACR3
Tachykinin receptor 3.
    
 
 0.618
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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