Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WDSUB1WD repeat, sterile alpha motif and U-box domain containing 1. (476 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.950
TTC37
Tetratricopeptide repeat domain 37.
    
 0.799
CDC73
Cell division cycle 73.
    
 0.760
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
 0.732
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.707
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.707
BTBD1
BTB domain containing 1.
      
 0.660
HBS1L
HBS1 like translational GTPase.
    
 0.660
DDX20
DEAD-box helicase 20.
    
 0.653
DDB1
Damage specific DNA binding protein 1.
    
 0.644
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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