Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM200ATransmembrane protein 200A. (278 aa)    
Predicted Functional Partners:
ENSVPAP00000011778
annotation not available
    
   0.856
GOSR1
Golgi SNAP receptor complex member 1.
    
   0.789
ENSVPAP00000001386
annotation not available
 
      0.776
ENSVPAP00000008435
annotation not available
      
 0.727
GABRE
Gamma-aminobutyric acid type A receptor epsilon subunit.
      
 0.726
TC2N
Tandem C2 domains, nuclear.
      
 0.720
ENSVPAP00000004467
annotation not available
      
 0.711
SUV39H2
Suppressor of variegation 3-9 homolog 2.
    
 
 0.687
DCT
Dopachrome tautomerase.
      
 0.684
GHRH
Growth hormone releasing hormone.
      
 0.645
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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