Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC13A1Solute carrier family 13 member 1. (594 aa)    
Predicted Functional Partners:
SLC3A1
Solute carrier family 3 member 1.
  
  
 0.708
ENSVPAP00000006332
annotation not available
  
 
 0.703
TEX11
Testis expressed 11.
      
 0.685
CEP290
Centrosomal protein 290.
      
 0.679
HPS3
HPS3 biogenesis of lysosomal organelles complex 2 subunit 1.
      
 0.676
POLA1
DNA polymerase alpha 1, catalytic subunit.
      
 0.623
SUCLG2
succinate-CoA ligase GDP-forming beta subunit.
     
 0.611
SLC15A1
Solute carrier family 15 member 1.
   
  
 0.608
SLC15A2
Solute carrier family 15 member 2.
   
  
 0.608
KYAT3
Kynurenine aminotransferase 3.
      
 0.596
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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