Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GCM2Glial cells missing transcription factor 2. (491 aa)    
Predicted Functional Partners:
FHL3
Four and a half LIM domains 3.
   
   0.907
CASR
Calcium sensing receptor.
   
 
 0.803
CREBBP
CREB binding protein.
    
   0.770
PTH
Parathyroid hormone.
   
 
 0.746
ZDHHC9
Zinc finger DHHC-type containing 9.
      
 0.625
ENSVPAP00000002458
annotation not available
      
 0.615
GNAQ
G protein subunit alpha q.
      
 0.615
CDC73
Cell division cycle 73.
      
 0.609
FHL5
Four and a half LIM domains 5.
   
   0.547
ENSVPAP00000006309
annotation not available
   
   0.541
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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