Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASB15Ankyrin repeat and SOCS box containing 15. (588 aa)    
Predicted Functional Partners:
ASB4
Ankyrin repeat and SOCS box containing 4.
  
 
0.765
ENSVPAP00000004752
annotation not available
    
 0.713
ENSVPAP00000004753
annotation not available
    
 0.713
CUL5
Cullin 5.
    
 0.680
METTL11B
Methyltransferase like 11B.
   
 
 0.664
FRMD7
FERM domain containing 7.
    
 0.647
IQUB
IQ motif and ubiquitin domain containing.
   
 
 0.642
SHOC1
Shortage in chiasmata 1.
      
 0.615
WDR49
WD repeat domain 49.
      
 0.613
COMMD1
Copper metabolism domain containing 1.
    
 0.609
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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