Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZFP69ZFP69 zinc finger protein. (523 aa)    
Predicted Functional Partners:
SORCS1
Sortilin related VPS10 domain containing receptor 1.
    
 
 0.692
TBC1D1
TBC1 domain family member 1.
      
 0.628
ENSVPAP00000003396
annotation not available
    
 0.582
PKP4
Plakophilin 4.
    
 
 0.571
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.530
SMAD2
SMAD family member 2.
    
  0.525
EXO5
Exonuclease 5.
      
 0.493
KCTD12
Potassium channel tetramerization domain containing 12.
    
  0.492
TOX4
TOX high mobility group box family member 4.
    
 0.467
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
    
 
 0.451
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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