Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF684Zinc finger protein 684. (375 aa)    
Predicted Functional Partners:
TRIM33
Tripartite motif containing 33.
    
  0.706
TRIM24
Tripartite motif containing 24.
    
  0.621
ENSVPAP00000003396
annotation not available
    
 0.582
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.530
KLHL5
Kelch like family member 5.
    
 0.459
ARID4A
AT-rich interaction domain 4A.
    
 0.441
ARID4B
AT-rich interaction domain 4B.
    
 0.441
ENSVPAP00000004371
annotation not available
    
  0.439
MRPS6
Mitochondrial ribosomal protein S6.
    
  0.437
ENSVPAP00000010419
annotation not available
   
  0.435
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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