Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
RIMS3Regulating synaptic membrane exocytosis 3. (235 aa)    
Predicted Functional Partners:
UNC13B
Unc-13 homolog B.
   
 0.929
ENSVPAP00000004415
annotation not available
   
 0.929
ENSVPAP00000008959
annotation not available
    
 0.876
ENSVPAP00000010768
annotation not available
    
 0.876
RAB3B
RAB3B, member RAS oncogene family.
   
 0.874
RAB3C
RAB3C, member RAS oncogene family.
    
 0.803
ERC1
ELKS/RAB6-interacting/CAST family member 1.
    
 
 0.753
ERC2
ELKS/RAB6-interacting/CAST family member 2.
    
 
 0.753
SNAP25
Synaptosome associated protein 25.
   
 
 0.723
FEZ1
Fasciculation and elongation protein zeta 1.
   
  
 0.704
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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