Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ARMT1Acidic residue methyltransferase 1. (441 aa)    
Predicted Functional Partners:
ATP6V1H
ATPase H+ transporting V1 subunit H.
    
   0.859
CCDC170
Coiled-coil domain containing 170.
      
 0.685
RMND1
Required for meiotic nuclear division 1 homolog.
   
  
 0.624
ENSVPAP00000003458
ATP6V1G2-DDX39B readthrough (NMD candidate).
    
 
 0.622
ATP6V1G3
ATPase H+ transporting V1 subunit G3.
    
 
 0.622
ATP6V1G1
ATPase H+ transporting V1 subunit G1.
    
 
 0.622
ZBTB2
Zinc finger and BTB domain containing 2.
      
 0.607
RNLS
Renalase, FAD dependent amine oxidase.
      
 0.514
ECHDC1
ethylmalonyl-CoA decarboxylase 1.
      
 0.511
MAX
MYC associated factor X.
      
 0.510
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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