Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SERPINB8Serpin family B member 8. (374 aa)    
Predicted Functional Partners:
OLA1
Obg like ATPase 1.
     
 0.756
ENSVPAP00000003700
annotation not available
     
 0.701
ENSVPAP00000001455
annotation not available
      
 0.686
KANSL2
KAT8 regulatory NSL complex subunit 2.
      
 0.685
ENSVPAP00000007062
annotation not available
      
 0.685
IFT81
Intraflagellar transport 81.
      
 0.685
ZCCHC2
Zinc finger CCHC-type containing 2.
      
 0.659
ENSVPAP00000000357
annotation not available
      
 0.605
CHST9
Carbohydrate sulfotransferase 9.
      
 0.599
CASP3
Caspase 3.
    
 0.588
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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