Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP1Matrix metallopeptidase 1. (469 aa)    
Predicted Functional Partners:
ITGA2
Integrin subunit alpha 2.
    
 0.822
TIMP4
TIMP metallopeptidase inhibitor 4.
    
 0.799
ENSVPAP00000002836
annotation not available
   
 0.766
MMP3
Stromelysin-1.
   
 0.766
MMP12
Matrix metallopeptidase 12.
   
 0.766
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.766
F2R
Coagulation factor II thrombin receptor.
    
 0.729
IL1B
Interleukin 1 beta.
   
 
 0.723
ENSVPAP00000005586
annotation not available
   
 
 0.713
MMP7
Matrix metallopeptidase 7.
   
 0.707
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.