Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP170Centrosomal protein 170. (1619 aa)    
Predicted Functional Partners:
CCDC68
Coiled-coil domain containing 68.
    
 
 0.982
ENSVPAP00000006070
annotation not available
    
 
 0.969
ENSVPAP00000000275
annotation not available
    
 
 0.943
ENSVPAP00000000175
annotation not available
    
 
 0.910
YWHAQ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta.
    
  0.872
NIN
Ninein.
    
 
 0.833
HERC1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
    
 
 0.820
AKAP9
A-kinase anchoring protein 9.
    
 0.811
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
   
   0.785
ENSVPAP00000002367
annotation not available
    
   0.774
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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