Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002866annotation not available (161 aa)    
Predicted Functional Partners:
WDR19
WD repeat domain 19.
    
 0.999
ENSVPAP00000003754
annotation not available
    
 0.999
TTC21B
Tetratricopeptide repeat domain 21B.
    
 0.999
ENSVPAP00000005024
annotation not available
    
 0.987
ENSVPAP00000005230
annotation not available
    
 0.987
C11orf74
Chromosome 11 open reading frame 74.
    
 
 0.982
INTU
Inturned planar cell polarity protein.
    
 0.918
ENSVPAP00000004627
annotation not available
    
 
 0.913
IFT81
Intraflagellar transport 81.
   
 
 0.887
IFT80
Intraflagellar transport 80.
    
 0.886
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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