Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002872annotation not available (70 aa)    
Predicted Functional Partners:
ATRNL1
Attractin like 1.
    
 
 0.765
ATRN
Attractin.
    
 
 0.723
LHFPL4
LHFPL tetraspan subfamily member 4.
      
 0.677
TDG
Thymine DNA glycosylase.
      
 0.668
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
      
 0.668
ENSVPAP00000003112
annotation not available
    
 
 0.638
ENSVPAP00000010164
annotation not available
      
 0.615
SETD5
SET domain containing 5.
      
 0.612
ENSVPAP00000002605
annotation not available
      
 0.520
ENSVPAP00000010229
annotation not available
      
 0.520
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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