Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ZC3H12CZinc finger CCCH-type containing 12C. (875 aa)    
Predicted Functional Partners:
ZNF641
Zinc finger protein 641.
   
    0.829
ZFAT
Zinc finger and AT-hook domain containing.
   
  
 0.730
MAGI2
Membrane associated guanylate kinase, WW and PDZ domain containing 2.
      
 0.722
KBTBD3
Kelch repeat and BTB domain containing 3.
   
  
 0.698
MYO3B
Myosin IIIB.
      
 0.662
ZC3H12B
Zinc finger CCCH-type containing 12B.
   
    0.650
NEDD8
NEDD8 ubiquitin like modifier.
    
 
 0.643
ZNF655
Zinc finger protein 655.
      
 0.639
VEZT
Vezatin, adherens junctions transmembrane protein.
   
  
 0.626
OPTN
Optineurin.
    
  0.622
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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