Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
DPCDDeleted in primary ciliary dyskinesia homolog (mouse). (134 aa)    
Predicted Functional Partners:
WDR92
WD repeat domain 92.
    
 0.761
FBXW4
F-box and WD repeat domain containing 4.
      
 0.746
RPAP3
RNA polymerase II associated protein 3.
    
 
 0.719
ENSVPAP00000005999
annotation not available
   
  
 0.713
POLL
DNA polymerase lambda.
      
 0.691
STK36
Serine/threonine kinase 36.
      
 0.672
DNAL1
Dynein axonemal light chain 1.
    
 0.656
POLDIP3
DNA polymerase delta interacting protein 3.
      
 0.656
TNC
Tenascin C.
    
 0.621
TNN
Tenascin N.
    
 0.621
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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