Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NPM3Nucleophosmin/nucleoplasmin 3. (176 aa)    
Predicted Functional Partners:
NPM1
Nucleophosmin 1.
   
   0.965
NEPRO
Nucleolus and neural progenitor protein.
    
   0.853
NCL
Nucleolin.
    
 
 0.851
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 
 0.849
ENSVPAP00000001657
annotation not available
    
 
 0.828
RPL3
Ribosomal protein L3.
    
   0.782
ENSVPAP00000007281
annotation not available
   
  
 0.692
NOL9
Nucleolar protein 9.
    
 
 0.690
TMEM167A
Transmembrane protein 167A.
      
 0.681
RESF1
Retroelement silencing factor 1.
      
 0.670
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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