Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OMGOligodendrocyte myelin glycoprotein. (441 aa)    
Predicted Functional Partners:
LINGO2
Leucine rich repeat and Ig domain containing 2.
   
 0.939
ENSVPAP00000009282
annotation not available
   
 
 0.927
PLP1
Proteolipid protein 1.
   
 
 0.844
ENSVPAP00000003045
annotation not available
   
 0.814
ENSVPAP00000003929
annotation not available
   
 0.814
TNR
Tenascin R.
   
 
 0.800
ARHGDIB
Rho GDP dissociation inhibitor beta.
     
 0.794
RTN1
Reticulon 1.
    
 0.782
SLC6A1
Solute carrier family 6 member 1.
   
 
 0.782
RTN3
Reticulon 3.
    
 0.782
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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