Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002923annotation not available (311 aa)    
Predicted Functional Partners:
ENSVPAP00000005903
annotation not available
    
 0.956
TBK1
TANK binding kinase 1.
   
 0.947
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
  0.944
PSMB1
Proteasome 20S subunit beta 1.
    
   0.876
NDEL1
nudE neurodevelopment protein 1 like 1.
    
   0.797
ENSVPAP00000000991
annotation not available
    
 0.794
NEK2
NIMA related kinase 2.
    
 
 0.778
ANLN
Anillin actin binding protein.
    
   0.774
TRIM23
Tripartite motif containing 23.
    
 0.711
BBOX1
Gamma-butyrobetaine hydroxylase 1.
      
 0.681
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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