Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITFG1Integrin alpha FG-GAP repeat containing 1. (509 aa)    
Predicted Functional Partners:
RELL1
RELT like 1.
      
 0.751
HAUS2
HAUS augmin like complex subunit 2.
      
 0.740
NME4
NME/NM23 nucleoside diphosphate kinase 4.
    
 
 0.720
MRPS5
Mitochondrial ribosomal protein S5.
    
 
 0.705
ENSVPAP00000007369
annotation not available
      
 0.702
PHKB
Phosphorylase kinase regulatory subunit beta.
   
  
 0.687
DENND5B
DENN domain containing 5B.
      
 0.687
MRPL19
Mitochondrial ribosomal protein L19.
      
 0.672
MRPL47
Mitochondrial ribosomal protein L47.
      
 0.669
ENSVPAP00000002047
annotation not available
      
 0.662
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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