Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PHKBPhosphorylase kinase regulatory subunit beta. (1089 aa)    
Predicted Functional Partners:
PHKA2
Phosphorylase kinase regulatory subunit alpha 2.
  
0.999
PHKA1
Phosphorylase kinase regulatory subunit alpha 1.
  
0.999
CALM1
Calmodulin 2.
    
 0.996
CALM2
Calmodulin 2.
    
 0.968
CALML4
Calmodulin like 4.
    
  0.946
EFCAB3
EF-hand calcium binding domain 3.
    
 0.936
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
    
 0.920
MPPED2
Metallophosphoesterase domain containing 2.
    
   0.811
GBE1
1,4-alpha-glucan branching enzyme 1.
      
 0.768
PSMA6
Proteasome 20S subunit alpha 6.
      
 0.766
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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