STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000002952annotation not available (340 aa)    
Predicted Functional Partners:
NUP214
Nucleoporin 214.
    
 
 0.893
ENSVPAP00000007278
annotation not available
    
 
 0.854
ENSVPAP00000001380
annotation not available
    
   0.772
ENSVPAP00000000478
annotation not available
      
 0.712
ENSVPAP00000010530
annotation not available
  
 0.681
NUP88
Nucleoporin 88.
   
 
 0.600
ENSVPAP00000004313
annotation not available
  
 
 0.595
DHX40
DEAH-box helicase 40.
   
  
 0.593
DHX29
DExH-box helicase 29.
   
  
 0.591
DHX57
DExH-box helicase 57.
   
  
 0.577
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.