Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM133AFamily with sequence similarity 133 member A. (248 aa)    
Predicted Functional Partners:
CCDC73
Coiled-coil domain containing 73.
      
 0.667
C3orf70
Chromosome 3 open reading frame 70.
      
 0.667
TENT5D
Terminal nucleotidyltransferase 5D.
      
 0.655
RNF151
Ring finger protein 151.
    
   0.623
THOC7
THO complex 7.
      
 0.615
ENSVPAP00000009009
annotation not available
      
 0.613
KNOP1
Lysine rich nucleolar protein 1.
      
 0.612
CLINT1
Clathrin interactor 1.
      
 0.610
ENSVPAP00000010617
annotation not available
      
 0.607
POLDIP3
DNA polymerase delta interacting protein 3.
      
 0.569
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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