Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDS5BPDS5 cohesin associated factor B. (1445 aa)    
Predicted Functional Partners:
PDS5A
PDS5 cohesin associated factor A.
  
0.999
WAPL
WAPL cohesin release factor.
   
 0.998
SMC3
Structural maintenance of chromosomes 3.
   
 0.997
STAG2
Stromal antigen 2.
   
 0.996
SMC1B
Structural maintenance of chromosomes 1B.
   
 0.995
STAG1
Stromal antigen 1.
   
 0.991
NIPBL
NIPBL cohesin loading factor.
   
 0.990
RAD21
RAD21 cohesin complex component.
   
 0.988
STAG3
Stromal antigen 3.
   
 0.951
ESCO2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
    
 0.925
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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