Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VCPValosin containing protein. (424 aa)    
Predicted Functional Partners:
UBXN1
UBX domain protein 1.
    
 0.999
NSFL1C
NSFL1 cofactor.
   
 0.999
VCPKMT
Valosin containing protein lysine methyltransferase.
   
 0.998
UBXN4
UBX domain protein 4.
   
 0.998
YOD1
YOD1 deubiquitinase.
   
 0.998
DERL1
Derlin 1.
   
 0.998
UBXN7
UBX domain protein 7.
   
 0.997
ENSVPAP00000009826
annotation not available
   
 0.996
AMFR
Autocrine motility factor receptor.
    
 0.995
DERL2
Derlin 2.
   
 0.995
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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