STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003014annotation not available (2636 aa)    
Predicted Functional Partners:
ENSVPAP00000005638
annotation not available
    
 0.917
F8
Coagulation factor VIII.
    
 0.854
ENSVPAP00000001777
annotation not available
 
      0.842
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.809
NUP214
Nucleoporin 214.
    
 0.755
SPARCL1
SPARC like 1.
   
 
 0.743
MYO6
Myosin VI.
    
 
 0.720
ZPLD1
Zona pellucida like domain containing 1.
      
 0.713
CLIC5
Chloride intracellular channel 5.
   
 
 0.707
NUP98
Nucleoporin 98.
    
 0.704
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.