ENSVPAP00000003017 protein (Vicugna pacos) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSVPAP00000003017

annotation not available (169 aa)

Predicted Functional Partners:

ENSVPAP00000006248

0.989

ENSVPAP00000002033

0.988

LRRC49

0.988

KIAA1841

0.965

TBC1D19

0.965

ENSVPAP00000011011

0.965

SMG8

0.878

ENSVPAP00000010346

0.777

ENSVPAP00000008967

0.769

ENSVPAP00000011308

0.677

Your Current Organism:

Vicugna pacos

NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSVPAP00000002033	ENSVPAP00000003017	ENSVPAP00000002033	ENSVPAP00000003017	annotation not available	annotation not available	0.988
ENSVPAP00000002033	ENSVPAP00000006248	ENSVPAP00000002033	ENSVPAP00000006248	annotation not available	annotation not available	0.984
ENSVPAP00000002033	ENSVPAP00000011011	ENSVPAP00000002033	ENSVPAP00000011011	annotation not available	annotation not available	0.980
ENSVPAP00000002033	KIAA1841	ENSVPAP00000002033	ENSVPAP00000000464	annotation not available	KIAA1841.	0.965
ENSVPAP00000002033	LRRC49	ENSVPAP00000002033	ENSVPAP00000010728	annotation not available	Leucine rich repeat containing 49.	0.990
ENSVPAP00000002033	TBC1D19	ENSVPAP00000002033	ENSVPAP00000003359	annotation not available	TBC1 domain family member 19.	0.967
ENSVPAP00000003017	ENSVPAP00000002033	ENSVPAP00000003017	ENSVPAP00000002033	annotation not available	annotation not available	0.988
ENSVPAP00000003017	ENSVPAP00000006248	ENSVPAP00000003017	ENSVPAP00000006248	annotation not available	annotation not available	0.989
ENSVPAP00000003017	ENSVPAP00000008967	ENSVPAP00000003017	ENSVPAP00000008967	annotation not available	annotation not available	0.769
ENSVPAP00000003017	ENSVPAP00000010346	ENSVPAP00000003017	ENSVPAP00000010346	annotation not available	annotation not available	0.777
ENSVPAP00000003017	ENSVPAP00000011011	ENSVPAP00000003017	ENSVPAP00000011011	annotation not available	annotation not available	0.965
ENSVPAP00000003017	ENSVPAP00000011308	ENSVPAP00000003017	ENSVPAP00000011308	annotation not available	annotation not available	0.677
ENSVPAP00000003017	KIAA1841	ENSVPAP00000003017	ENSVPAP00000000464	annotation not available	KIAA1841.	0.965
ENSVPAP00000003017	LRRC49	ENSVPAP00000003017	ENSVPAP00000010728	annotation not available	Leucine rich repeat containing 49.	0.988
ENSVPAP00000003017	SMG8	ENSVPAP00000003017	ENSVPAP00000000349	annotation not available	SMG8 nonsense mediated mRNA decay factor.	0.878
ENSVPAP00000003017	TBC1D19	ENSVPAP00000003017	ENSVPAP00000003359	annotation not available	TBC1 domain family member 19.	0.965
ENSVPAP00000006248	ENSVPAP00000002033	ENSVPAP00000006248	ENSVPAP00000002033	annotation not available	annotation not available	0.984
ENSVPAP00000006248	ENSVPAP00000003017	ENSVPAP00000006248	ENSVPAP00000003017	annotation not available	annotation not available	0.989
ENSVPAP00000006248	ENSVPAP00000010346	ENSVPAP00000006248	ENSVPAP00000010346	annotation not available	annotation not available	0.770
ENSVPAP00000006248	ENSVPAP00000011011	ENSVPAP00000006248	ENSVPAP00000011011	annotation not available	annotation not available	0.965