Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CFL2Cofilin 2. (166 aa)    
Predicted Functional Partners:
ENSVPAP00000004192
annotation not available
  
 
0.999
SSH2
Slingshot protein phosphatase 2.
    
 0.982
ENSVPAP00000007731
annotation not available
   
 0.981
ACTB
Actin beta.
   
 0.980
DSTN
Destrin, actin depolymerizing factor.
   
   0.970
PFN4
Profilin family member 4.
   
 0.929
ENSVPAP00000010877
annotation not available
    
 
 0.919
ENSVPAP00000006432
annotation not available
   
 
 0.903
CAP1
Cyclase associated actin cytoskeleton regulatory protein 1.
   
 0.866
CAPZA1
Capping actin protein of muscle Z-line subunit alpha 1.
   
 
 0.848
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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