Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003029annotation not available (389 aa)    
Predicted Functional Partners:
ABCD4
ATP binding cassette subfamily D member 4.
    
   0.866
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
      
 0.813
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
      
 0.678
ASAP1
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1.
      
 0.664
ENSVPAP00000008180
annotation not available
      
 0.646
COL4A4
Collagen type IV alpha 4 chain.
      
 0.627
CRIPT
CXXC repeat containing interactor of PDZ3 domain.
      
 0.594
FYTTD1
Forty-two-three domain containing 1.
      
 0.592
NFX1
Nuclear transcription factor, X-box binding 1.
      
 0.562
NFXL1
Nuclear transcription factor, X-box binding like 1.
      
 0.562
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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