Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSVPAP00000003063annotation not available (605 aa)    
Predicted Functional Partners:
AUTS2
Activator of transcription and developmental regulator AUTS2.
      
 0.685
ENSVPAP00000006389
annotation not available
      
 0.669
IFI30
IFI30 lysosomal thiol reductase.
      
 0.659
SH2D4B
SH2 domain containing 4B.
      
 0.601
SCML2
Scm polycomb group protein like 2.
      
 0.540
ENSVPAP00000003169
annotation not available
      
 0.540
POC5
POC5 centriolar protein.
   
  
 0.538
ENSVPAP00000006990
annotation not available
      
 0.523
SCMH1
Scm polycomb group protein homolog 1.
      
 0.503
KCNE1
Potassium voltage-gated channel subfamily E regulatory subunit 1.
      
 0.498
Your Current Organism:
Vicugna pacos
NCBI taxonomy Id: 30538
Other names: Lama guanicoe pacos, Lama pacos, V. pacos, alpaca
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